SubtiBank SubtiBank
Version comparison:

2018-05-04 17:02:382025-05-21 03:56:56

description

similar to ABC transporter (ATP-binding protein), involved in resistance to linearmycin

similar to [SW|ABC transporter] (ATP-binding protein), involved in resistance to linearmycin

locus

BSU08310

BSU_08310

geneLength

933

936

product

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

outlinks

bsu

BSU08310

BSU_08310

Gene

Coordinates

905,816 → 906,751

905,816 906,751

The protein

Protein family

[SW|ABC transporter] domain (according to Swiss-Prot)

[SW|ABC transporter superfamily] (according to UniProt)

Biological materials

Mutant

MGNA-C354 (yfiL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2352 NBRP B. subtilis, Japan]

BKE08310 (Δ[[gene|lnrL]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08310 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTCGTCTCACTCCTTTT, downstream forward: _UP4_TTGCGGGATTGAGGAGGGAC

BKK08310 (Δ[[gene|lnrL]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08310 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTCGTCTCACTCCTTTT, downstream forward: _UP4_TTGCGGGATTGAGGAGGGAC

MGNA-C354 (yfiL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2352 NBRP B. subtilis, Japan]

BKE08310 ([[gene|lnrL]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08310 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTCGTCTCACTCCTTTT, downstream forward: _UP4_TTGCGGGATTGAGGAGGGAC

BKK08310 ([[gene|lnrL]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08310 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGTCGTCTCACTCCTTTT, downstream forward: _UP4_TTGCGGGATTGAGGAGGGAC

References

10092453, 26647299, 27766092, 28461449

10092453, 26647299, 27766092, 28461449, 32973732

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|ABC transporter domain] (aa 2-232) (according to UniProt)

The protein

Structure

[PDB|4YER] (from Thermotoga maritima, 39% identity)